Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SOX2P48431 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SOX2P48431 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SOX2P48431 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
SOX2P48431 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SOX2P48431 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SOX2P48431 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
SOX2P48431 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.39□□□□□ -0.11
SOX2P48431 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.39□□□□□ -0.11
SOX2P48431 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.39□□□□□ -0.11
SOX2P48431 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 ELK2BP-201ENST00000415014 1224 ntBASIC14.39□□□□□ -0.11
SOX2P48431 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AC107918.2-201ENST00000530817 355 ntBASIC14.39□□□□□ -0.11
SOX2P48431 SART3-203ENST00000546611 1184 ntBASIC14.39□□□□□ -0.11
SOX2P48431 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AC020765.3-201ENST00000613051 740 ntBASIC14.39□□□□□ -0.11
SOX2P48431 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.39□□□□□ -0.11
SOX2P48431 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 AC093458.2-201ENST00000623150 629 ntBASIC14.39□□□□□ -0.11
SOX2P48431 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SOX2P48431 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
SOX2P48431 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SOX2P48431 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.39□□□□□ -0.11
SOX2P48431 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SOX2P48431 AC006504.4-201ENST00000592118 1568 ntBASIC14.39□□□□□ -0.11
SOX2P48431 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SOX2P48431 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.38□□□□□ -0.11
SOX2P48431 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.38□□□□□ -0.11
SOX2P48431 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SOX2P48431 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.38□□□□□ -0.11
SOX2P48431 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SOX2P48431 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SOX2P48431 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.38□□□□□ -0.11
SOX2P48431 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms