Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC009078.2-202ENST00000463353 338 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC034105.1-201ENST00000563488 319 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A1P43005 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC1A1P43005 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC1A1P43005 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC104109.2-201ENST00000602919 1418 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC1A1P43005 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A1P43005 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC1A1P43005 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A1P43005 PRYP6-201ENST00000514804 343 ntBASIC17.03■□□□□ 0.32
SLC1A1P43005 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC1A1P43005 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A1P43005 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.03■□□□□ 0.32
SLC1A1P43005 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A1P43005 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A1P43005 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A1P43005 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A1P43005 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A1P43005 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 AP001282.1-201ENST00000531301 1499 ntBASIC17.02■□□□□ 0.32
SLC1A1P43005 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC1A1P43005 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC1A1P43005 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC1A1P43005 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A1P43005 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC1A1P43005 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC1A1P43005 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A1P43005 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A1P43005 AC126177.1-201ENST00000547829 2218 ntBASIC17.02■□□□□ 0.32
SLC1A1P43005 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC1A1P43005 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC1A1P43005 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC1A1P43005 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A1P43005 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC1A1P43005 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 PRAL-201ENST00000624952 3286 ntBASIC17.01■□□□□ 0.31
SLC1A1P43005 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A1P43005 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms