Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC002056.1-201ENST00000395613 760 ntBASIC16.23■□□□□ 0.19
SLC1A2P43004 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A2P43004 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC002347.1-201ENST00000569543 541 ntBASIC16.23■□□□□ 0.19
SLC1A2P43004 FAM197Y3-203ENST00000618346 717 ntBASIC16.23■□□□□ 0.19
SLC1A2P43004 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC1A2P43004 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A2P43004 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A2P43004 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A2P43004 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A2P43004 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A2P43004 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC1A2P43004 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 PMS2P7-201ENST00000506558 1336 ntBASIC16.22■□□□□ 0.19
SLC1A2P43004 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A2P43004 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A2P43004 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC1A2P43004 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC1A2P43004 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A2P43004 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC1A2P43004 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A2P43004 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A2P43004 HAUS4P1-201ENST00000406739 1145 ntBASIC16.22■□□□□ 0.19
SLC1A2P43004 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A2P43004 AC112191.1-201ENST00000523689 701 ntBASIC16.22■□□□□ 0.19
SLC1A2P43004 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC1A2P43004 AL365330.1-201ENST00000607459 531 ntBASIC16.22■□□□□ 0.19
SLC1A2P43004 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A2P43004 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC1A2P43004 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 NFIC-211ENST00000641145 8399 ntBASIC16.22■□□□□ 0.19
SLC1A2P43004 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC1A2P43004 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A2P43004 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A2P43004 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 AC026396.1-201ENST00000419388 421 ntBASIC16.21■□□□□ 0.19
SLC1A2P43004 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC1A2P43004 AC245100.5-201ENST00000452108 331 ntBASIC16.21■□□□□ 0.19
SLC1A2P43004 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SLC1A2P43004 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC1A2P43004 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 AP003680.1-201ENST00000598970 3660 ntBASIC16.21■□□□□ 0.19
SLC1A2P43004 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A2P43004 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A2P43004 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A2P43004 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A2P43004 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A2P43004 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms