Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL353705.2-201ENST00000428243 662 ntBASIC16.17■□□□□ 0.18
HMGCLP35914 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCLP35914 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGCLP35914 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HMGCLP35914 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HMGCLP35914 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.17■□□□□ 0.18
HMGCLP35914 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HMGCLP35914 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 AL513477.1-201ENST00000602865 2407 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 MST1L-201ENST00000442552 2185 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCLP35914 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC109322.1-201ENST00000524499 1264 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 AC069262.1-201ENST00000539058 672 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCLP35914 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC026979.3-201ENST00000607315 403 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC024909.3-201ENST00000611513 2257 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCLP35914 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
HMGCLP35914 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 PCDHA1-201ENST00000378133 2726 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 AP001282.1-201ENST00000531301 1499 ntBASIC16.16■□□□□ 0.18
HMGCLP35914 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGCLP35914 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCLP35914 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCLP35914 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCLP35914 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HMGCLP35914 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 CDC14C-201ENST00000428251 1719 ntBASIC16.15■□□□□ 0.18
HMGCLP35914 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.15■□□□□ 0.18
HMGCLP35914 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCLP35914 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.15■□□□□ 0.18
HMGCLP35914 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 AC025678.2-201ENST00000562061 970 ntBASIC16.15■□□□□ 0.18
HMGCLP35914 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.15■□□□□ 0.18
HMGCLP35914 AC007967.4-201ENST00000614700 386 ntBASIC16.15■□□□□ 0.18
HMGCLP35914 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCLP35914 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 1282.3 ms