Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTNNA1P35221 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNNA1P35221 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNNA1P35221 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNNA1P35221 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.24■□□□□ 0.35
CTNNA1P35221 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 FLJ16779-201ENST00000612722 7638 ntBASIC17.24■□□□□ 0.35
CTNNA1P35221 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 KRT18P67-201ENST00000432816 1264 ntBASIC17.24■□□□□ 0.35
CTNNA1P35221 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.24■□□□□ 0.35
CTNNA1P35221 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 AL160237.2-201ENST00000556165 472 ntBASIC17.24■□□□□ 0.35
CTNNA1P35221 MIR3909-201ENST00000579518 119 ntBASIC17.24■□□□□ 0.35
CTNNA1P35221 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.24■□□□□ 0.35
CTNNA1P35221 AL121912.1-201ENST00000603683 238 ntBASIC17.24■□□□□ 0.35
CTNNA1P35221 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CTNNA1P35221 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTNNA1P35221 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTNNA1P35221 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CTNNA1P35221 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.24■□□□□ 0.35
CTNNA1P35221 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNNA1P35221 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNNA1P35221 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.23■□□□□ 0.35
CTNNA1P35221 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTNNA1P35221 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.23■□□□□ 0.35
CTNNA1P35221 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTNNA1P35221 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 EMBP1-201ENST00000458200 901 ntBASIC17.23■□□□□ 0.35
CTNNA1P35221 AF186996.4-201ENST00000467186 377 ntBASIC17.23■□□□□ 0.35
CTNNA1P35221 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.23■□□□□ 0.35
CTNNA1P35221 AC021097.1-201ENST00000607902 574 ntBASIC17.23■□□□□ 0.35
CTNNA1P35221 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTNNA1P35221 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTNNA1P35221 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTNNA1P35221 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTNNA1P35221 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNNA1P35221 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNNA1P35221 AC022532.1-201ENST00000624563 1728 ntBASIC17.22■□□□□ 0.35
CTNNA1P35221 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNNA1P35221 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CTNNA1P35221 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms