Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC005622.1-201ENST00000636801 1703 ntBASIC17.73■□□□□ 0.43
RFX1P22670 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 AC002056.1-201ENST00000395613 760 ntBASIC17.73■□□□□ 0.43
RFX1P22670 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.73■□□□□ 0.43
RFX1P22670 SPDYE11-202ENST00000450699 704 ntBASIC17.73■□□□□ 0.43
RFX1P22670 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 SPDYE9P-201ENST00000570642 692 ntBASIC17.73■□□□□ 0.43
RFX1P22670 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.73■□□□□ 0.43
RFX1P22670 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 SPDYE10P-202ENST00000612005 668 ntBASIC17.73■□□□□ 0.43
RFX1P22670 SPDYE8P-202ENST00000612377 668 ntBASIC17.73■□□□□ 0.43
RFX1P22670 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
RFX1P22670 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFX1P22670 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RFX1P22670 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
RFX1P22670 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 AC079328.2-201ENST00000561241 3354 ntBASIC17.72■□□□□ 0.43
RFX1P22670 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.72■□□□□ 0.43
RFX1P22670 AC140658.5-201ENST00000438532 169 ntBASIC17.72■□□□□ 0.43
RFX1P22670 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX1P22670 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX1P22670 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.72■□□□□ 0.43
RFX1P22670 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 AL603832.2-201ENST00000566195 2125 ntBASIC17.72■□□□□ 0.43
RFX1P22670 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
RFX1P22670 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFX1P22670 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.72■□□□□ 0.43
RFX1P22670 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.71■□□□□ 0.43
RFX1P22670 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX1P22670 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 AL627223.1-201ENST00000416693 442 ntBASIC17.71■□□□□ 0.43
RFX1P22670 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.71■□□□□ 0.43
RFX1P22670 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.71■□□□□ 0.43
RFX1P22670 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.71■□□□□ 0.43
RFX1P22670 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.71■□□□□ 0.43
RFX1P22670 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RFX1P22670 AC009093.7-201ENST00000623853 1223 ntBASIC17.71■□□□□ 0.43
RFX1P22670 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFX1P22670 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX1P22670 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms