Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 GPX1P2-201ENST00000429271 606 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SPCS2P4-201ENST00000436160 681 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 CEND1P1-201ENST00000451006 455 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 IGHV3-62-201ENST00000520057 340 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AC010327.4-202ENST00000591484 748 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SPTSSB-204ENST00000617024 1292 ntBASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPA1P20036 TNRC18P3-201ENST00000441896 2691 ntBASIC16.43■□□□□ 0.22
HLA-DPA1P20036 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 MIR1233-2-201ENST00000408138 82 ntBASIC16.43■□□□□ 0.22
HLA-DPA1P20036 MIR1233-1-201ENST00000408722 82 ntBASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC142381.1-201ENST00000426099 345 ntBASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 MIR4321-201ENST00000592276 80 ntBASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DPA1P20036 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 FOXO1B-201ENST00000504678 1527 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 MIR346-201ENST00000362234 95 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 UPF3AP3-201ENST00000420996 769 ntBASIC16.42■□□□□ 0.22
HLA-DPA1P20036 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.42■□□□□ 0.22
HLA-DPA1P20036 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms