Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC3P19447 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.83■□□□□ 0.6
ERCC3P19447 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.83■□□□□ 0.6
ERCC3P19447 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.83■□□□□ 0.6
ERCC3P19447 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.83■□□□□ 0.6
ERCC3P19447 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
ERCC3P19447 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC3P19447 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ERCC3P19447 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC3P19447 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.82■□□□□ 0.6
ERCC3P19447 PCDH8P1-201ENST00000428983 2773 ntBASIC18.82■□□□□ 0.6
ERCC3P19447 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.82■□□□□ 0.6
ERCC3P19447 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC3P19447 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 API5-211ENST00000534695 560 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC3P19447 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC3P19447 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC3P19447 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC3P19447 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC3P19447 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ERCC3P19447 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ERCC3P19447 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
ERCC3P19447 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ERCC3P19447 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ERCC3P19447 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 GNAQP1-201ENST00000444815 1067 ntBASIC18.81■□□□□ 0.6
ERCC3P19447 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.81■□□□□ 0.6
ERCC3P19447 AC135586.1-201ENST00000539323 574 ntBASIC18.81■□□□□ 0.6
ERCC3P19447 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.81■□□□□ 0.6
ERCC3P19447 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 AL008721.1-201ENST00000609964 604 ntBASIC18.81■□□□□ 0.6
ERCC3P19447 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
ERCC3P19447 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERCC3P19447 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 CU639417.3-201ENST00000624240 1404 ntBASIC18.81■□□□□ 0.6
ERCC3P19447 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC3P19447 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC3P19447 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC3P19447 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC3P19447 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ERCC3P19447 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERCC3P19447 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC3P19447 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC3P19447 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC3P19447 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms