Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.94■□□□□ 0.94
MS4A1P11836 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 AC006058.4-201ENST00000624016 1670 ntBASIC20.94■□□□□ 0.94
MS4A1P11836 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 AC093724.1-201ENST00000448659 1027 ntBASIC20.94■□□□□ 0.94
MS4A1P11836 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.94■□□□□ 0.94
MS4A1P11836 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.94■□□□□ 0.94
MS4A1P11836 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.94■□□□□ 0.94
MS4A1P11836 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.94■□□□□ 0.94
MS4A1P11836 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.94■□□□□ 0.94
MS4A1P11836 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.94■□□□□ 0.94
MS4A1P11836 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MS4A1P11836 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.94■□□□□ 0.94
MS4A1P11836 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MS4A1P11836 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.93■□□□□ 0.94
MS4A1P11836 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MS4A1P11836 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MS4A1P11836 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MS4A1P11836 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.93■□□□□ 0.94
MS4A1P11836 KRT18P2-201ENST00000447938 1258 ntBASIC20.93■□□□□ 0.94
MS4A1P11836 AC074386.1-202ENST00000463561 864 ntBASIC20.93■□□□□ 0.94
MS4A1P11836 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.93■□□□□ 0.94
MS4A1P11836 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.93■□□□□ 0.94
MS4A1P11836 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.93■□□□□ 0.94
MS4A1P11836 AC018845.2-201ENST00000568326 409 ntBASIC20.93■□□□□ 0.94
MS4A1P11836 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
MS4A1P11836 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
MS4A1P11836 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MS4A1P11836 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.93■□□□□ 0.94
MS4A1P11836 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.92■□□□□ 0.94
MS4A1P11836 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.92■□□□□ 0.94
MS4A1P11836 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 AC007967.2-201ENST00000432613 625 ntBASIC20.92■□□□□ 0.94
MS4A1P11836 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.92■□□□□ 0.94
MS4A1P11836 RNA5SP416-201ENST00000516838 111 ntBASIC20.92■□□□□ 0.94
MS4A1P11836 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
MS4A1P11836 PDPK2P-202ENST00000562415 1191 ntBASIC20.92■□□□□ 0.94
MS4A1P11836 AC068137.2-201ENST00000605408 478 ntBASIC20.92■□□□□ 0.94
MS4A1P11836 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.92■□□□□ 0.94
MS4A1P11836 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.92■□□□□ 0.94
MS4A1P11836 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 DBET-201ENST00000630918 3363 ntBASIC20.92■□□□□ 0.94
MS4A1P11836 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.92■□□□□ 0.94
MS4A1P11836 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MS4A1P11836 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms