Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM228BP0C875 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.36■□□□□ 0.37
FAM228BP0C875 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM228BP0C875 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FAM228BP0C875 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
FAM228BP0C875 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.36■□□□□ 0.37
FAM228BP0C875 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM228BP0C875 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM228BP0C875 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FAM228BP0C875 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM228BP0C875 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FAM228BP0C875 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FAM228BP0C875 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SSR4P1-203ENST00000599569 2260 ntBASIC17.35■□□□□ 0.37
FAM228BP0C875 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 AC136621.1-201ENST00000624017 2304 ntBASIC17.35■□□□□ 0.37
FAM228BP0C875 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.35■□□□□ 0.37
FAM228BP0C875 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.35■□□□□ 0.37
FAM228BP0C875 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM228BP0C875 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 AC023141.13-201ENST00000604991 943 ntBASIC17.35■□□□□ 0.37
FAM228BP0C875 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.35■□□□□ 0.37
FAM228BP0C875 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FAM228BP0C875 CICP13-201ENST00000422015 2789 ntBASIC17.35■□□□□ 0.37
FAM228BP0C875 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.35■□□□□ 0.37
FAM228BP0C875 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM228BP0C875 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM228BP0C875 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
FAM228BP0C875 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.34■□□□□ 0.37
FAM228BP0C875 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
FAM228BP0C875 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.34■□□□□ 0.37
FAM228BP0C875 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.34■□□□□ 0.37
FAM228BP0C875 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.34■□□□□ 0.37
FAM228BP0C875 AC093909.1-201ENST00000504731 1122 ntBASIC17.34■□□□□ 0.37
FAM228BP0C875 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
FAM228BP0C875 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.34■□□□□ 0.37
FAM228BP0C875 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM228BP0C875 Z83851.2-201ENST00000609564 659 ntBASIC17.34■□□□□ 0.37
FAM228BP0C875 AC025580.3-201ENST00000617932 1424 ntBASIC17.34■□□□□ 0.37
FAM228BP0C875 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 AL589702.1-201ENST00000641229 1509 ntBASIC17.34■□□□□ 0.37
FAM228BP0C875 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM228BP0C875 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms