Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COL5A2P05997 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.01■□□□□ 0.95
COL5A2P05997 AC139713.2-201ENST00000641328 2723 ntBASIC21.01■□□□□ 0.95
COL5A2P05997 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.01■□□□□ 0.95
COL5A2P05997 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL5A2P05997 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL5A2P05997 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
COL5A2P05997 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.01■□□□□ 0.95
COL5A2P05997 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.01■□□□□ 0.95
COL5A2P05997 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL5A2P05997 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21■□□□□ 0.95
COL5A2P05997 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL5A2P05997 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21■□□□□ 0.95
COL5A2P05997 AC023310.1-201ENST00000554836 735 ntBASIC21■□□□□ 0.95
COL5A2P05997 AC105129.2-201ENST00000559536 390 ntBASIC21■□□□□ 0.95
COL5A2P05997 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21■□□□□ 0.95
COL5A2P05997 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21■□□□□ 0.95
COL5A2P05997 RN7SL190P-201ENST00000582519 257 ntBASIC21■□□□□ 0.95
COL5A2P05997 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL5A2P05997 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21■□□□□ 0.95
COL5A2P05997 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21■□□□□ 0.95
COL5A2P05997 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL5A2P05997 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL5A2P05997 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21■□□□□ 0.95
COL5A2P05997 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 ACKR1-201ENST00000368121 1240 ntBASIC20.99■□□□□ 0.95
COL5A2P05997 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 AL590640.2-201ENST00000457038 527 ntBASIC20.99■□□□□ 0.95
COL5A2P05997 PHKG1P2-201ENST00000457537 863 ntBASIC20.99■□□□□ 0.95
COL5A2P05997 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.99■□□□□ 0.95
COL5A2P05997 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.99■□□□□ 0.95
COL5A2P05997 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
COL5A2P05997 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL5A2P05997 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.99■□□□□ 0.95
COL5A2P05997 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL5A2P05997 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 AL138709.1-201ENST00000614840 1693 ntBASIC20.98■□□□□ 0.95
COL5A2P05997 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 AP001282.1-201ENST00000531301 1499 ntBASIC20.98■□□□□ 0.95
COL5A2P05997 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.98■□□□□ 0.95
COL5A2P05997 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
COL5A2P05997 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 MIR4741-201ENST00000579822 90 ntBASIC20.98■□□□□ 0.95
COL5A2P05997 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.98■□□□□ 0.95
COL5A2P05997 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.98■□□□□ 0.95
COL5A2P05997 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL5A2P05997 AC134407.2-201ENST00000625089 1978 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms