Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRAP04437 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TCRAP04437 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 AL031133.1-201ENST00000406807 723 ntBASIC12.44□□□□□ -0.42
TCRAP04437 NUS1P2-201ENST00000417358 873 ntBASIC12.44□□□□□ -0.42
TCRAP04437 HCG4-201ENST00000418983 998 ntBASIC12.44□□□□□ -0.42
TCRAP04437 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.44□□□□□ -0.42
TCRAP04437 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRAP04437 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.44□□□□□ -0.42
TCRAP04437 AL591684.3-201ENST00000605187 298 ntBASIC12.44□□□□□ -0.42
TCRAP04437 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TCRAP04437 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRAP04437 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
TCRAP04437 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 U82695.1-201ENST00000635752 1889 ntBASIC12.44□□□□□ -0.42
TCRAP04437 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.44□□□□□ -0.42
TCRAP04437 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.44□□□□□ -0.42
TCRAP04437 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TCRAP04437 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 AL109954.1-202ENST00000564051 2148 ntBASIC12.43□□□□□ -0.42
TCRAP04437 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 RCN1P1-201ENST00000400413 996 ntBASIC12.43□□□□□ -0.42
TCRAP04437 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 SLC25A6P2-201ENST00000497974 877 ntBASIC12.43□□□□□ -0.42
TCRAP04437 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 AP000867.3-201ENST00000524675 377 ntBASIC12.43□□□□□ -0.42
TCRAP04437 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.43□□□□□ -0.42
TCRAP04437 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.43□□□□□ -0.42
TCRAP04437 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 AC005412.3-201ENST00000580309 715 ntBASIC12.43□□□□□ -0.42
TCRAP04437 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 AC099336.1-202ENST00000602961 463 ntBASIC12.43□□□□□ -0.42
TCRAP04437 LINC01023-201ENST00000606054 436 ntBASIC12.43□□□□□ -0.42
TCRAP04437 AP001269.4-201ENST00000609611 512 ntBASIC12.43□□□□□ -0.42
TCRAP04437 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.43□□□□□ -0.42
TCRAP04437 AL139288.1-201ENST00000623748 933 ntBASIC12.43□□□□□ -0.42
TCRAP04437 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.43□□□□□ -0.42
TCRAP04437 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.43□□□□□ -0.42
TCRAP04437 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TCRAP04437 AC008677.1-201ENST00000519230 1561 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms