Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
MBD3O95983 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
MBD3O95983 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
MBD3O95983 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.7■□□□□ 0.58
MBD3O95983 AP001269.4-201ENST00000609611 512 ntBASIC18.7■□□□□ 0.58
MBD3O95983 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.7■□□□□ 0.58
MBD3O95983 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 AL139288.1-201ENST00000623748 933 ntBASIC18.7■□□□□ 0.58
MBD3O95983 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD3O95983 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD3O95983 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MBD3O95983 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3O95983 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
MBD3O95983 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3O95983 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3O95983 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 AC011477.6-201ENST00000604980 1927 ntBASIC18.69■□□□□ 0.58
MBD3O95983 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 PTCHD3P3-201ENST00000403073 906 ntBASIC18.69■□□□□ 0.58
MBD3O95983 AC104819.1-201ENST00000504587 486 ntBASIC18.69■□□□□ 0.58
MBD3O95983 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3O95983 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.69■□□□□ 0.58
MBD3O95983 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MBD3O95983 AC005332.1-201ENST00000577698 1310 ntBASIC18.69■□□□□ 0.58
MBD3O95983 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3O95983 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3O95983 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
MBD3O95983 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD3O95983 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD3O95983 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MBD3O95983 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.68■□□□□ 0.58
MBD3O95983 DUX4L26-201ENST00000489078 1255 ntBASIC18.68■□□□□ 0.58
MBD3O95983 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.68■□□□□ 0.58
MBD3O95983 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.68■□□□□ 0.58
MBD3O95983 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.68■□□□□ 0.58
MBD3O95983 NKAPP1-205ENST00000585790 367 ntBASIC18.68■□□□□ 0.58
MBD3O95983 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms