Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH8O95206 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH8O95206 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH8O95206 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH8O95206 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH8O95206 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDH8O95206 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PCDH8O95206 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 AC087499.5-201ENST00000452760 1342 ntBASIC16.23■□□□□ 0.19
PCDH8O95206 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
PCDH8O95206 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 MRPS18AP1-201ENST00000414458 589 ntBASIC16.23■□□□□ 0.19
PCDH8O95206 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDH8O95206 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH8O95206 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDH8O95206 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH8O95206 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH8O95206 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
PCDH8O95206 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PCDH8O95206 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDH8O95206 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDH8O95206 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 SERBP1P5-201ENST00000510079 1181 ntBASIC16.22■□□□□ 0.19
PCDH8O95206 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH8O95206 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 AL365330.1-201ENST00000607459 531 ntBASIC16.22■□□□□ 0.19
PCDH8O95206 AC009118.2-201ENST00000613275 655 ntBASIC16.22■□□□□ 0.19
PCDH8O95206 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
PCDH8O95206 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PCDH8O95206 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH8O95206 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH8O95206 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PCDH8O95206 AC092171.3-201ENST00000610122 2651 ntBASIC16.22■□□□□ 0.19
PCDH8O95206 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH8O95206 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 PRORSD1P-202ENST00000563365 2154 ntBASIC16.21■□□□□ 0.19
PCDH8O95206 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCDH8O95206 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms