Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC016396.2-201ENST00000562575 1417 ntBASIC17.47■□□□□ 0.39
CSPG5O95196 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSPG5O95196 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CSPG5O95196 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.46■□□□□ 0.39
CSPG5O95196 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.46■□□□□ 0.39
CSPG5O95196 AC141586.5-201ENST00000624546 2050 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CSPG5O95196 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
CSPG5O95196 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CSPG5O95196 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.46■□□□□ 0.39
CSPG5O95196 MYCLP2-201ENST00000449268 967 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CSPG5O95196 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.46■□□□□ 0.39
CSPG5O95196 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CSPG5O95196 MIR4259-201ENST00000584466 101 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 AL162274.1-201ENST00000617191 1098 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 AL109936.8-201ENST00000641772 604 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 AL023806.1-201ENST00000603994 1649 ntBASIC17.46■□□□□ 0.39
CSPG5O95196 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSPG5O95196 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSPG5O95196 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CSPG5O95196 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.46■□□□□ 0.38
CSPG5O95196 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CSPG5O95196 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CSPG5O95196 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG5O95196 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 AC245100.3-201ENST00000441281 285 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.45■□□□□ 0.38
CSPG5O95196 AC022210.1-201ENST00000449856 793 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG5O95196 AC093004.1-201ENST00000508850 424 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.45■□□□□ 0.38
CSPG5O95196 AC023310.3-201ENST00000557027 670 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 AC100756.1-201ENST00000562736 682 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 AC138749.3-201ENST00000567691 622 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.45■□□□□ 0.38
CSPG5O95196 CTBP2P3-201ENST00000585629 1255 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 AC116165.1-201ENST00000611806 668 ntBASIC17.45■□□□□ 0.38
CSPG5O95196 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.45■□□□□ 0.38
CSPG5O95196 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
CSPG5O95196 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CSPG5O95196 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSPG5O95196 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSPG5O95196 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.44■□□□□ 0.38
CSPG5O95196 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 AC092658.1-201ENST00000505836 891 ntBASIC17.44■□□□□ 0.38
CSPG5O95196 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CSPG5O95196 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.44■□□□□ 0.38
CSPG5O95196 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.44■□□□□ 0.38
CSPG5O95196 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms