Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CCR12P-201ENST00000446203 998 ntBASIC14.21□□□□□ -0.13
UPK1BO75841 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 AC026366.1-201ENST00000488803 879 ntBASIC14.21□□□□□ -0.13
UPK1BO75841 AP003733.1-201ENST00000491725 852 ntBASIC14.21□□□□□ -0.13
UPK1BO75841 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.21□□□□□ -0.13
UPK1BO75841 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
UPK1BO75841 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK1BO75841 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
UPK1BO75841 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UPK1BO75841 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.14
UPK1BO75841 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.21□□□□□ -0.14
UPK1BO75841 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 KRT8P44-201ENST00000441609 1350 ntBASIC14.21□□□□□ -0.14
UPK1BO75841 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UPK1BO75841 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 AL592424.1-201ENST00000563624 1536 ntBASIC14.2□□□□□ -0.14
UPK1BO75841 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 DGCR9-201ENST00000609630 2415 ntBASIC14.2□□□□□ -0.14
UPK1BO75841 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.2□□□□□ -0.14
UPK1BO75841 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 BX640514.1-201ENST00000583223 1918 ntBASIC14.2□□□□□ -0.14
UPK1BO75841 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.2□□□□□ -0.14
UPK1BO75841 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.2□□□□□ -0.14
UPK1BO75841 AC009947.2-201ENST00000444014 672 ntBASIC14.2□□□□□ -0.14
UPK1BO75841 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.2□□□□□ -0.14
UPK1BO75841 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.2□□□□□ -0.14
UPK1BO75841 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.2□□□□□ -0.14
UPK1BO75841 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.2□□□□□ -0.14
UPK1BO75841 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK1BO75841 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK1BO75841 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK1BO75841 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UPK1BO75841 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms