Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PFDN1O60925 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.53□□□□□ -0.08
PFDN1O60925 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PFDN1O60925 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PFDN1O60925 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
PFDN1O60925 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.53□□□□□ -0.08
PFDN1O60925 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.52□□□□□ -0.08
PFDN1O60925 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN1O60925 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.52□□□□□ -0.08
PFDN1O60925 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PFDN1O60925 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PFDN1O60925 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PFDN1O60925 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN1O60925 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN1O60925 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN1O60925 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN1O60925 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN1O60925 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PFDN1O60925 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PFDN1O60925 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN1O60925 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN1O60925 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN1O60925 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 BX276092.7-203ENST00000637198 1536 ntBASIC14.51□□□□□ -0.09
PFDN1O60925 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PFDN1O60925 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 BX640514.1-201ENST00000583223 1918 ntBASIC14.51□□□□□ -0.09
PFDN1O60925 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 AC083964.2-201ENST00000623988 2396 ntBASIC14.51□□□□□ -0.09
PFDN1O60925 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PFDN1O60925 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms