Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.06■□□□□ 0.32
OPHN1O60890 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 FAM86GP-201ENST00000448322 971 ntBASIC17.06■□□□□ 0.32
OPHN1O60890 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.06■□□□□ 0.32
OPHN1O60890 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.06■□□□□ 0.32
OPHN1O60890 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.06■□□□□ 0.32
OPHN1O60890 AC092902.6-201ENST00000641783 218 ntBASIC17.06■□□□□ 0.32
OPHN1O60890 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.06■□□□□ 0.32
OPHN1O60890 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
OPHN1O60890 MTHFR-217ENST00000641820 1569 ntBASIC17.06■□□□□ 0.32
OPHN1O60890 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
OPHN1O60890 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 AC023141.5-201ENST00000458585 616 ntBASIC17.05■□□□□ 0.32
OPHN1O60890 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.05■□□□□ 0.32
OPHN1O60890 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.05■□□□□ 0.32
OPHN1O60890 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.05■□□□□ 0.32
OPHN1O60890 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 OR7E47P-204ENST00000575924 449 ntBASIC17.05■□□□□ 0.32
OPHN1O60890 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.05■□□□□ 0.32
OPHN1O60890 MIR4745-201ENST00000577608 62 ntBASIC17.05■□□□□ 0.32
OPHN1O60890 AC068137.2-201ENST00000605408 478 ntBASIC17.05■□□□□ 0.32
OPHN1O60890 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 AC092364.2-201ENST00000596710 2692 ntBASIC17.05■□□□□ 0.32
OPHN1O60890 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
OPHN1O60890 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.05■□□□□ 0.32
OPHN1O60890 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
OPHN1O60890 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
OPHN1O60890 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms