Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.48□□□□□ -0.09
SGCEO43556 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SGCEO43556 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCEO43556 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 MED15P5-201ENST00000423150 992 ntBASIC14.48□□□□□ -0.09
SGCEO43556 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.48□□□□□ -0.09
SGCEO43556 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.48□□□□□ -0.09
SGCEO43556 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.48□□□□□ -0.09
SGCEO43556 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCEO43556 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.48□□□□□ -0.09
SGCEO43556 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.48□□□□□ -0.09
SGCEO43556 AC106730.1-201ENST00000566722 1090 ntBASIC14.48□□□□□ -0.09
SGCEO43556 AC027601.4-201ENST00000611259 610 ntBASIC14.48□□□□□ -0.09
SGCEO43556 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
SGCEO43556 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.48□□□□□ -0.09
SGCEO43556 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SGCEO43556 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SGCEO43556 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SGCEO43556 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SGCEO43556 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SGCEO43556 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SGCEO43556 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 AC132872.4-202ENST00000622924 2756 ntBASIC14.47□□□□□ -0.09
SGCEO43556 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SGCEO43556 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.47□□□□□ -0.09
SGCEO43556 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.47□□□□□ -0.09
SGCEO43556 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 KRT18P2-201ENST00000447938 1258 ntBASIC14.47□□□□□ -0.09
SGCEO43556 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.47□□□□□ -0.09
SGCEO43556 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.47□□□□□ -0.09
SGCEO43556 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.47□□□□□ -0.09
SGCEO43556 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 KRT19P2-202ENST00000557173 1012 ntBASIC14.47□□□□□ -0.09
SGCEO43556 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.47□□□□□ -0.09
SGCEO43556 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.47□□□□□ -0.09
SGCEO43556 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SGCEO43556 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.47□□□□□ -0.09
SGCEO43556 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SGCEO43556 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SGCEO43556 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SGCEO43556 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCEO43556 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCEO43556 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.46□□□□□ -0.09
SGCEO43556 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SGCEO43556 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SGCEO43556 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms