Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XRCC2O43543 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XRCC2O43543 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
XRCC2O43543 AC002056.1-201ENST00000395613 760 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.21□□□□□ -0.13
XRCC2O43543 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
XRCC2O43543 MED15P5-201ENST00000423150 992 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.21□□□□□ -0.13
XRCC2O43543 AC074386.1-202ENST00000463561 864 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 PDPK2P-202ENST00000562415 1191 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.21□□□□□ -0.13
XRCC2O43543 AC106730.1-201ENST00000566722 1090 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
XRCC2O43543 FAM197Y3-203ENST00000618346 717 ntBASIC14.21□□□□□ -0.13
XRCC2O43543 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
XRCC2O43543 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
XRCC2O43543 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
XRCC2O43543 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
XRCC2O43543 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
XRCC2O43543 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
XRCC2O43543 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
XRCC2O43543 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.21□□□□□ -0.14
XRCC2O43543 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
XRCC2O43543 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC022188.1-201ENST00000620960 1664 ntBASIC14.2□□□□□ -0.14
XRCC2O43543 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 MIR648-201ENST00000385046 94 ntBASIC14.2□□□□□ -0.14
XRCC2O43543 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.2□□□□□ -0.14
XRCC2O43543 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.2□□□□□ -0.14
XRCC2O43543 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC112191.1-201ENST00000523689 701 ntBASIC14.2□□□□□ -0.14
XRCC2O43543 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
XRCC2O43543 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.2□□□□□ -0.14
XRCC2O43543 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.2□□□□□ -0.14
XRCC2O43543 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.2□□□□□ -0.14
XRCC2O43543 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.2□□□□□ -0.14
XRCC2O43543 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
XRCC2O43543 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.2□□□□□ -0.14
XRCC2O43543 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
XRCC2O43543 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 AC092919.2-201ENST00000623631 1645 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms