Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC025048.3-201ENST00000590609 569 ntBASIC18.55■□□□□ 0.56
ATP2A1O14983 AC005702.4-201ENST00000618393 416 ntBASIC18.55■□□□□ 0.56
ATP2A1O14983 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 FER1L4-210ENST00000615531 5998 ntBASIC18.55■□□□□ 0.56
ATP2A1O14983 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ATP2A1O14983 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ATP2A1O14983 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP2A1O14983 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 RNF216P1-203ENST00000404404 2427 ntBASIC18.54■□□□□ 0.56
ATP2A1O14983 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
ATP2A1O14983 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.54■□□□□ 0.56
ATP2A1O14983 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP2A1O14983 EEF1DP4-201ENST00000446006 880 ntBASIC18.54■□□□□ 0.56
ATP2A1O14983 AC245100.5-201ENST00000452108 331 ntBASIC18.54■□□□□ 0.56
ATP2A1O14983 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 MEIS3P1-201ENST00000495167 958 ntBASIC18.54■□□□□ 0.56
ATP2A1O14983 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
ATP2A1O14983 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.54■□□□□ 0.56
ATP2A1O14983 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ATP2A1O14983 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
ATP2A1O14983 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP2A1O14983 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP2A1O14983 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP2A1O14983 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ATP2A1O14983 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 OR8S1-201ENST00000310194 1080 ntBASIC18.53■□□□□ 0.56
ATP2A1O14983 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ATP2A1O14983 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATP2A1O14983 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP2A1O14983 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP2A1O14983 KRT17P7-201ENST00000451704 1104 ntBASIC18.53■□□□□ 0.56
ATP2A1O14983 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ATP2A1O14983 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
ATP2A1O14983 AC074044.1-201ENST00000609673 707 ntBASIC18.53■□□□□ 0.56
ATP2A1O14983 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ATP2A1O14983 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 AL592424.1-201ENST00000563624 1536 ntBASIC18.53■□□□□ 0.56
ATP2A1O14983 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP2A1O14983 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ATP2A1O14983 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP2A1O14983 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP2A1O14983 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2A1O14983 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A1O14983 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms