Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT3HB4E1H0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.08■□□□□ 0.17
SUPT3HB4E1H0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 MIR648-201ENST00000385046 94 ntBASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AC096734.2-201ENST00000562054 433 ntBASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 Z83851.2-201ENST00000609564 659 ntBASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SUPT3HB4E1H0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 AC009078.2-202ENST00000463353 338 ntBASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 AC023141.13-201ENST00000604991 943 ntBASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 AC007064.4-201ENST00000637740 555 ntBASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 PRAL-201ENST00000624952 3286 ntBASIC16.07■□□□□ 0.16
SUPT3HB4E1H0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT3HB4E1H0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms