Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 FDX1P1-201ENST00000449115 551 ntBASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
AP4B1Q9Y6B7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC023908.3-201ENST00000564211 3047 ntBASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC018712.1-201ENST00000455767 687 ntBASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC009078.2-202ENST00000463353 338 ntBASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP4B1Q9Y6B7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 MRPL3P1-201ENST00000400109 1033 ntBASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.71■□□□□ 0.11
AP4B1Q9Y6B7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 375.2 ms