Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC24.09■■□□□ 1.45
CDC42BPBQ9Y5S2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 REXO1L1P-202ENST00000608646 1974 ntBASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 CYP2AB1P-202ENST00000454440 1456 ntBASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDC42BPBQ9Y5S2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC24.08■■□□□ 1.44
CDC42BPBQ9Y5S2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 RNU1-114P-201ENST00000365297 166 ntBASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AL133267.1-201ENST00000398220 340 ntBASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AC009486.1-201ENST00000569860 813 ntBASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.07■■□□□ 1.44
CDC42BPBQ9Y5S2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 IGHJ2P-201ENST00000454480 60 ntBASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 AL118558.3-201ENST00000607414 1079 ntBASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPBQ9Y5S2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 HNRNPA1P48-202ENST00000565308 961 ntBASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPBQ9Y5S2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 CALR4P-201ENST00000431943 946 ntBASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 AC078819.1-201ENST00000547454 765 ntBASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 AC012085.1-201ENST00000548270 765 ntBASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC24.04■■□□□ 1.44
CDC42BPBQ9Y5S2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms