Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC061975.2-201ENST00000581722 295 ntBASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC024267.1-201ENST00000582320 895 ntBASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGC4Q9Y5F7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 LINC02199-201ENST00000506655 2702 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AL512356.2-201ENST00000546955 174 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AC025678.2-201ENST00000562061 970 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AL365330.1-201ENST00000607459 531 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AC003101.2-201ENST00000612557 442 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AC018529.1-201ENST00000613063 361 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 MIR6080-201ENST00000617359 66 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 Z92544.3-201ENST00000624747 417 ntBASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGC4Q9Y5F7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 AC069262.1-201ENST00000539058 672 ntBASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 MIR4453-201ENST00000584019 89 ntBASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 MIR4321-201ENST00000592276 80 ntBASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGC4Q9Y5F7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms