Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00588Q9Y4M8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ALOX12P2-203ENST00000570921 1945 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AC087499.5-201ENST00000452760 1342 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AC005052.1-201ENST00000625181 2492 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 MRPS18AP1-201ENST00000414458 589 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AL080243.2-201ENST00000418783 582 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 MIR4321-201ENST00000592276 80 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AC008761.3-201ENST00000624803 892 ntBASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00588Q9Y4M8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 AGGF1P2-201ENST00000426656 2106 ntBASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms