Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 AC245100.5-201ENST00000452108 331 ntBASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCAF1Q9Y4C2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AC132872.4-202ENST00000622924 2756 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 MIR940-201ENST00000401276 94 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AL355306.1-201ENST00000415580 579 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AC040169.1-201ENST00000565382 521 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AL138918.1-201ENST00000568306 659 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AC073389.1-201ENST00000595595 795 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TCAF1Q9Y4C2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 AP005117.1-202ENST00000581724 1908 ntBASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 AL022342.1-201ENST00000400363 863 ntBASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 FAM58CP-201ENST00000435741 640 ntBASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCAF1Q9Y4C2 KRT18P58-201ENST00000527480 1120 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms