Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC007541.1-201ENST00000570282 1469 ntBASIC22.07■■□□□ 1.12
NINLQ9Y2I6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 AC099398.1-201ENST00000567919 2776 ntBASIC22.07■■□□□ 1.12
NINLQ9Y2I6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 ZBTB45P2-201ENST00000452245 1531 ntBASIC22.07■■□□□ 1.12
NINLQ9Y2I6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 FZD10-202ENST00000539839 3282 ntBASIC22.07■■□□□ 1.12
NINLQ9Y2I6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NINLQ9Y2I6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 ALOX12P2-203ENST00000570921 1945 ntBASIC22.06■■□□□ 1.12
NINLQ9Y2I6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 AC084018.2-201ENST00000613093 2607 ntBASIC22.06■■□□□ 1.12
NINLQ9Y2I6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 HAUS4P1-201ENST00000406739 1145 ntBASIC22.06■■□□□ 1.12
NINLQ9Y2I6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 GNAQP1-201ENST00000444815 1067 ntBASIC22.06■■□□□ 1.12
NINLQ9Y2I6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NINLQ9Y2I6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 MIR1909-201ENST00000411312 80 ntBASIC22.05■■□□□ 1.12
NINLQ9Y2I6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 AL118508.1-201ENST00000613502 2345 ntBASIC22.05■■□□□ 1.12
NINLQ9Y2I6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 BNIP3P1-202ENST00000550043 1585 ntBASIC22.05■■□□□ 1.12
NINLQ9Y2I6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NINLQ9Y2I6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 RPL13P2-201ENST00000440687 659 ntBASIC22.04■■□□□ 1.12
NINLQ9Y2I6 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC092658.1-201ENST00000505836 891 ntBASIC22.04■■□□□ 1.12
NINLQ9Y2I6 TPRX2P-201ENST00000535362 881 ntBASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 WASH4P-201ENST00000564273 1246 ntBASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AL133338.1-201ENST00000565695 1517 ntBASIC22.04■■□□□ 1.12
NINLQ9Y2I6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms