Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 RARRES2P8-201ENST00000566335 367 ntBASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 FLJ16779-201ENST00000612722 7638 ntBASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS9D1Q9Y2B5 PCDHA1-201ENST00000378133 2726 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 FAM86C2P-203ENST00000528684 1004 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 AC040169.1-201ENST00000565382 521 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 AL513190.1-201ENST00000621254 727 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 AC009452.1-201ENST00000640823 606 ntBASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
VPS9D1Q9Y2B5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AC046158.3-201ENST00000624947 2558 ntBASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
VPS9D1Q9Y2B5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms