Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC015910.1-201ENST00000579400 975 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 MTHFR-217ENST00000641820 1569 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 AC106886.4-201ENST00000623557 2502 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 FLJ38576-201ENST00000623820 2459 ntBASIC23.77■■□□□ 1.4
SHANK2Q9UPX8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 AC104989.1-201ENST00000519711 778 ntBASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 BTNL10-201ENST00000595971 695 ntBASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHANK2Q9UPX8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 CLUHP6-201ENST00000580789 941 ntBASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC23.75■■□□□ 1.39
SHANK2Q9UPX8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AC092171.3-201ENST00000610122 2651 ntBASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms