Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC136604.1-202ENST00000425471 771 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 RNMTL1P1-201ENST00000454103 560 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 KRT127P-201ENST00000547183 433 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC005041.3-201ENST00000606287 649 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 POR-209ENST00000439269 1858 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 GHSR-202ENST00000427970 912 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TARDBPP1-201ENST00000442013 1203 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC026803.1-201ENST00000569130 274 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC024267.1-201ENST00000582320 895 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TBC1D3J-201ENST00000620719 1426 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AC073592.2-201ENST00000623062 780 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NHP2P1-201ENST00000335274 462 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 NF1P11-201ENST00000621292 1282 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 AL354989.2-201ENST00000435838 1540 ntBASIC6.47□□□□□ -1.37
MACF1Q9UPN3 HLF-202ENST00000430986 1385 ntTSL 2 BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MACF1Q9UPN3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AL137060.1-201ENST00000618151 2648 ntBASIC6.46□□□□□ -1.37
MACF1Q9UPN3 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AC026470.1-201ENST00000478038 846 ntBASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 PC-204ENST00000524491 1714 ntTSL 2 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 BAK1P1-201ENST00000317045 636 ntBASIC6.46□□□□□ -1.37
MACF1Q9UPN3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
MACF1Q9UPN3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms