Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC069120.2-201ENST00000524091 540 ntBASIC15.06■□□□□ 0
NPIPA1Q9UND3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 MIR4453-201ENST00000584019 89 ntBASIC15.06■□□□□ 0
NPIPA1Q9UND3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPIPA1Q9UND3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NPIPA1Q9UND3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
NPIPA1Q9UND3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPA1Q9UND3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.05■□□□□ 0
NPIPA1Q9UND3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPIPA1Q9UND3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.05■□□□□ 0
NPIPA1Q9UND3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 TSPY16P-201ENST00000449843 468 ntBASIC15.05■□□□□ -0
NPIPA1Q9UND3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 MIR4492-201ENST00000581627 80 ntBASIC15.05■□□□□ -0
NPIPA1Q9UND3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 AC006538.1-201ENST00000567905 1585 ntBASIC15.05■□□□□ -0
NPIPA1Q9UND3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NPIPA1Q9UND3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPIPA1Q9UND3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 AC236430.1-201ENST00000402231 743 ntBASIC15.04■□□□□ -0
NPIPA1Q9UND3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 AL139011.1-202ENST00000642063 584 ntBASIC15.04■□□□□ -0
NPIPA1Q9UND3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NPIPA1Q9UND3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPA1Q9UND3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms