Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 UGT1A2P-201ENST00000454886 866 ntBASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 SDHAP3-202ENST00000515467 728 ntBASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 MIR4313-201ENST00000580760 101 ntBASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 MIR3197-201ENST00000582241 73 ntBASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 AC004790.1-201ENST00000612686 536 ntBASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.66■■□□□ 1.06
NPC1L1Q9UHC9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 AC044860.1-202ENST00000559481 777 ntBASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 AL391069.4-201ENST00000609583 481 ntBASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPC1L1Q9UHC9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 MIR661-201ENST00000384842 89 ntBASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NPC1L1Q9UHC9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPC1L1Q9UHC9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms