Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 PAWRP1-201ENST00000451083 565 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 POU5F1P6-201ENST00000466990 990 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 MPDU1-223ENST00000582151 728 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 MTDHP3-201ENST00000594186 672 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 ALOX12P2-203ENST00000570921 1945 ntBASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.27□□□□□ -0.13
PCDHB16Q9NRJ7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 GGTLC5P-201ENST00000617623 998 ntBASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SNX18-202ENST00000343017 3140 ntBASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 LINC01144-201ENST00000626198 1710 ntBASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCDHB16Q9NRJ7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms