Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 AL139011.1-202ENST00000642063 584 ntBASIC16.86■□□□□ 0.29
HPS4Q9NQG7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 AL645728.1-201ENST00000366221 2101 ntBASIC16.85■□□□□ 0.29
HPS4Q9NQG7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.85■□□□□ 0.29
HPS4Q9NQG7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS4Q9NQG7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 MEIS3P1-201ENST00000495167 958 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 AL132655.2-201ENST00000596276 594 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.84■□□□□ 0.29
HPS4Q9NQG7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS4Q9NQG7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms