Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 FAM220BP-201ENST00000377689 816 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 MIR4453-201ENST00000584019 89 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 AC003101.2-201ENST00000612557 442 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 AC022211.2-201ENST00000585075 2527 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 AC106886.4-201ENST00000623557 2502 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 LINC01144-201ENST00000626198 1710 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF304Q9HCX3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 AC107890.1-201ENST00000422478 521 ntBASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 RNA5SP410-201ENST00000516285 106 ntBASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 DUX4L27-201ENST00000554796 1261 ntBASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 UBALD1-205ENST00000590891 2641 ntBASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 GGT3P-204ENST00000453783 1664 ntBASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF304Q9HCX3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 FLJ38576-201ENST00000623820 2459 ntBASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 AC140878.1-201ENST00000565277 250 ntBASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF304Q9HCX3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms