Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.64■□□□□ 0.09
PIF1Q9H611 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 RBM17P3-201ENST00000417687 1192 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 KRT18P31-201ENST00000506277 1292 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 FOSL1P1-201ENST00000511041 816 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.64■□□□□ 0.09
PIF1Q9H611 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 AC091304.2-201ENST00000564639 760 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.64■□□□□ 0.09
PIF1Q9H611 CYP2A7P1-201ENST00000595391 815 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 AL732292.2-201ENST00000609649 430 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 REXO1L3P-201ENST00000622202 1288 ntBASIC15.64■□□□□ 0.09
PIF1Q9H611 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.64■□□□□ 0.09
PIF1Q9H611 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PIF1Q9H611 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.64■□□□□ 0.09
PIF1Q9H611 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PIF1Q9H611 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PIF1Q9H611 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PIF1Q9H611 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 LINC01144-201ENST00000626198 1710 ntBASIC15.63■□□□□ 0.09
PIF1Q9H611 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PIF1Q9H611 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 PTCHD3P3-201ENST00000403073 906 ntBASIC15.63■□□□□ 0.09
PIF1Q9H611 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.63■□□□□ 0.09
PIF1Q9H611 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.63■□□□□ 0.09
PIF1Q9H611 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.63■□□□□ 0.09
PIF1Q9H611 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.63■□□□□ 0.09
PIF1Q9H611 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.63■□□□□ 0.09
PIF1Q9H611 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 CLEC4GP1-201ENST00000596555 870 ntBASIC15.63■□□□□ 0.09
PIF1Q9H611 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.63■□□□□ 0.09
PIF1Q9H611 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.63■□□□□ 0.09
PIF1Q9H611 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PIF1Q9H611 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.63■□□□□ 0.09
PIF1Q9H611 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PIF1Q9H611 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PIF1Q9H611 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.63■□□□□ 0.09
PIF1Q9H611 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PIF1Q9H611 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PIF1Q9H611 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms