Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 GGT4P-201ENST00000623672 1708 ntBASIC17.69■□□□□ 0.42
HIPK3Q9H422 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 BRWD1P1-201ENST00000401091 371 ntBASIC17.68■□□□□ 0.42
HIPK3Q9H422 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AL442647.2-201ENST00000429864 857 ntBASIC17.68■□□□□ 0.42
HIPK3Q9H422 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.68■□□□□ 0.42
HIPK3Q9H422 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 AC124067.4-201ENST00000519691 2379 ntBASIC17.68■□□□□ 0.42
HIPK3Q9H422 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK3Q9H422 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK3Q9H422 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 AC141586.5-201ENST00000624546 2050 ntBASIC17.67■□□□□ 0.42
HIPK3Q9H422 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 AL355994.2-201ENST00000447882 704 ntBASIC17.67■□□□□ 0.42
HIPK3Q9H422 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 MIR5189-201ENST00000577370 114 ntBASIC17.67■□□□□ 0.42
HIPK3Q9H422 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 AL022328.1-201ENST00000610050 478 ntBASIC17.67■□□□□ 0.42
HIPK3Q9H422 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK3Q9H422 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.67■□□□□ 0.42
HIPK3Q9H422 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 Z97205.2-201ENST00000564697 1639 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 OR6D1P-202ENST00000641007 5290 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 AC099336.1-201ENST00000417053 1171 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 ACTG1P3-201ENST00000431775 1114 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TDH-203ENST00000531764 1110 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 MIR4321-201ENST00000592276 80 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 LINC01115-203ENST00000606068 577 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 AL365330.1-201ENST00000607459 531 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 AL391069.4-201ENST00000609583 481 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms