Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AC009477.1-201ENST00000452936 217 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AP005018.1-201ENST00000525475 301 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AC027369.6-201ENST00000525520 931 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 LINC01144-201ENST00000626198 1710 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 AL035456.1-201ENST00000456064 1369 ntBASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPAP1Q9BWH6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC073439.1-201ENST00000624121 1774 ntBASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 AL358472.5-202ENST00000641448 1267 ntBASIC19.7■□□□□ 0.74
RPAP1Q9BWH6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 AC132872.4-202ENST00000622924 2756 ntBASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 PIN1P1-201ENST00000412108 996 ntBASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 SPTLC1P1-201ENST00000447199 261 ntBASIC19.69■□□□□ 0.74
RPAP1Q9BWH6 AC093724.1-201ENST00000448659 1027 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms