Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SPENQ96T58 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.43□□□□□ -0.1
SPENQ96T58 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.43□□□□□ -0.1
SPENQ96T58 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 KRT8P37-201ENST00000451609 1420 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 EEF1DP4-201ENST00000446006 880 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 KRT8P13-201ENST00000463294 1010 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 MIR4722-201ENST00000578292 60 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 MIR6727-201ENST00000620702 65 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 AC092978.1-202ENST00000637590 1327 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SPENQ96T58 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.42□□□□□ -0.1
SPENQ96T58 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SPENQ96T58 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 RN7SL399P-201ENST00000471648 279 ntBASIC14.42□□□□□ -0.1
SPENQ96T58 AP001258.2-201ENST00000529891 490 ntBASIC14.42□□□□□ -0.1
SPENQ96T58 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.42□□□□□ -0.1
SPENQ96T58 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 AC134407.2-201ENST00000625089 1978 ntBASIC14.42□□□□□ -0.1
SPENQ96T58 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.42□□□□□ -0.1
SPENQ96T58 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SPENQ96T58 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SPENQ96T58 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPENQ96T58 BRI3BPP1-201ENST00000594224 787 ntBASIC14.42□□□□□ -0.1
SPENQ96T58 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SPENQ96T58 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.41□□□□□ -0.1
SPENQ96T58 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.41□□□□□ -0.1
SPENQ96T58 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SPENQ96T58 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.41□□□□□ -0.1
SPENQ96T58 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 CALR4P-201ENST00000431943 946 ntBASIC14.41□□□□□ -0.1
SPENQ96T58 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.41□□□□□ -0.1
SPENQ96T58 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 AGGF1P2-201ENST00000426656 2106 ntBASIC14.41□□□□□ -0.1
SPENQ96T58 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.41□□□□□ -0.1
SPENQ96T58 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SPENQ96T58 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.41□□□□□ -0.1
SPENQ96T58 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.41□□□□□ -0.1
SPENQ96T58 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPENQ96T58 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPENQ96T58 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms