Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.46■□□□□ 0.07
COL21A1Q96P44 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 GPAA1P2-202ENST00000606848 1787 ntBASIC15.46■□□□□ 0.07
COL21A1Q96P44 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL21A1Q96P44 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 PCGF3-213ENST00000620529 1899 ntBASIC15.46■□□□□ 0.06
COL21A1Q96P44 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.46■□□□□ 0.06
COL21A1Q96P44 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.46■□□□□ 0.06
COL21A1Q96P44 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COL21A1Q96P44 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
COL21A1Q96P44 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COL21A1Q96P44 AC006449.6-201ENST00000612330 2296 ntBASIC15.45■□□□□ 0.06
COL21A1Q96P44 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL21A1Q96P44 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 AC023824.1-201ENST00000562945 2975 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL21A1Q96P44 HMGA1P7-201ENST00000406908 502 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 AC023274.1-201ENST00000418278 595 ntBASIC15.44■□□□□ 0.06
COL21A1Q96P44 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.44■□□□□ 0.06
COL21A1Q96P44 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms