Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AC092850.2-201ENST00000623821 2697 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 FAM220BP-201ENST00000377689 816 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 MTND6P24-201ENST00000440466 518 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PCDHB17P-201ENST00000539533 2393 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AL603756.1-201ENST00000606511 2163 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AC009118.2-201ENST00000613275 655 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AL139011.1-202ENST00000642063 584 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF48Q96MX3 AL136379.1-201ENST00000623471 2642 ntBASIC13.26□□□□□ -0.29
ZNF48Q96MX3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 KRT8P39-201ENST00000396270 1433 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 AL353705.2-201ENST00000428243 662 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 GAPDHP21-201ENST00000450301 1010 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 BANF1P1-201ENST00000553684 263 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 TEX28P1-201ENST00000613479 1221 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 TEX28P2-201ENST00000617764 1221 ntBASIC13.25□□□□□ -0.29
ZNF48Q96MX3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZNF48Q96MX3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms