Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 AC015936.2-201ENST00000593177 259 ntBASIC21.22■□□□□ 0.99
NBPF4Q96M43 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 AC092171.3-201ENST00000610122 2651 ntBASIC21.22■□□□□ 0.99
NBPF4Q96M43 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NBPF4Q96M43 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.22■□□□□ 0.99
NBPF4Q96M43 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 AC234783.1-201ENST00000441761 496 ntBASIC21.21■□□□□ 0.99
NBPF4Q96M43 AC243562.2-201ENST00000561247 970 ntBASIC21.21■□□□□ 0.99
NBPF4Q96M43 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.21■□□□□ 0.99
NBPF4Q96M43 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 REXO1L8P-201ENST00000604378 1897 ntBASIC21.21■□□□□ 0.99
NBPF4Q96M43 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.21■□□□□ 0.99
NBPF4Q96M43 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NBPF4Q96M43 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NBPF4Q96M43 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NBPF4Q96M43 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NBPF4Q96M43 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NBPF4Q96M43 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
NBPF4Q96M43 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 KRT223P-202ENST00000449164 1292 ntBASIC21.2■□□□□ 0.98
NBPF4Q96M43 AC245100.5-201ENST00000452108 331 ntBASIC21.2■□□□□ 0.98
NBPF4Q96M43 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 AP005482.1-201ENST00000563722 1273 ntBASIC21.2■□□□□ 0.98
NBPF4Q96M43 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NBPF4Q96M43 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NBPF4Q96M43 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 BNIP3P42-201ENST00000454982 569 ntBASIC21.19■□□□□ 0.98
NBPF4Q96M43 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 BNIP3P29-201ENST00000598302 571 ntBASIC21.19■□□□□ 0.98
NBPF4Q96M43 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.19■□□□□ 0.98
NBPF4Q96M43 AC011447.5-201ENST00000616168 564 ntBASIC21.19■□□□□ 0.98
NBPF4Q96M43 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NBPF4Q96M43 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms