Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIPA1Q96FS4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 U82695.1-201ENST00000635752 1889 ntBASIC16.29■□□□□ 0.2
SIPA1Q96FS4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 OR8S1-201ENST00000310194 1080 ntBASIC16.29■□□□□ 0.2
SIPA1Q96FS4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 AC005915.1-201ENST00000624912 2018 ntBASIC16.29■□□□□ 0.2
SIPA1Q96FS4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SIPA1Q96FS4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 AL645608.8-201ENST00000606034 2086 ntBASIC16.28■□□□□ 0.2
SIPA1Q96FS4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 AL365330.1-201ENST00000607459 531 ntBASIC16.28■□□□□ 0.2
SIPA1Q96FS4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIPA1Q96FS4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 DGCR5-201ENST00000399539 862 ntBASIC16.27■□□□□ 0.2
SIPA1Q96FS4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.27■□□□□ 0.2
SIPA1Q96FS4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms