Protein–RNA interactions for Protein: Q96CE8

TM4SF18, Transmembrane 4 L6 family member 18, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF18Q96CE8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.41■□□□□ 0.06
TM4SF18Q96CE8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HAUS4P1-201ENST00000406739 1145 ntBASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HTR5BP-201ENST00000430851 1154 ntBASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AC245100.5-201ENST00000452108 331 ntBASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 LINC01225-203ENST00000563550 1244 ntBASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TM4SF18Q96CE8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 MIR346-201ENST00000362234 95 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SPCS2P4-201ENST00000436160 681 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SPDYE11-202ENST00000450699 704 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 RN7SL589P-201ENST00000481268 310 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 ALG1L5P-201ENST00000482043 771 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC079140.1-201ENST00000508039 487 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SPDYE9P-201ENST00000570642 692 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SPDYE10P-202ENST00000612005 668 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SPDYE8P-202ENST00000612377 668 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PAUPAR-201ENST00000630360 2965 ntBASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TM4SF18Q96CE8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms