Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AC093520.2-201ENST00000561830 333 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AL139011.1-202ENST00000642063 584 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 UXT-AS1-201ENST00000590504 1525 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 KRT8P39-201ENST00000396270 1433 ntBASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3KBP1Q96B97 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 MIR600HG-201ENST00000449175 5984 ntBASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AL162727.3-201ENST00000635661 2787 ntBASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 FAM86GP-201ENST00000448322 971 ntBASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AC106028.4-201ENST00000614509 607 ntBASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SH3KBP1Q96B97 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 AL512356.2-201ENST00000546955 174 ntBASIC16.17■□□□□ 0.18
SH3KBP1Q96B97 LINC01225-203ENST00000563550 1244 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms