Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 AC112693.3-201ENST00000624819 1983 ntBASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 AC010203.1-204ENST00000548782 407 ntBASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 AC073592.4-201ENST00000623827 446 ntBASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SMIM4Q8WVI0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SMIM4Q8WVI0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SMIM4Q8WVI0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms