Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ME2P1-201ENST00000426028 1970 ntBASIC19.9■□□□□ 0.78
RTL9Q8NET4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 UBALD1-205ENST00000590891 2641 ntBASIC19.9■□□□□ 0.78
RTL9Q8NET4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 AL162274.1-201ENST00000617191 1098 ntBASIC19.9■□□□□ 0.78
RTL9Q8NET4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTL9Q8NET4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RTL9Q8NET4 KRT8P37-201ENST00000451609 1420 ntBASIC19.9■□□□□ 0.78
RTL9Q8NET4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RTL9Q8NET4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.89■□□□□ 0.78
RTL9Q8NET4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTL9Q8NET4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTL9Q8NET4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
RTL9Q8NET4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RTL9Q8NET4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.89■□□□□ 0.78
RTL9Q8NET4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC112492.5-201ENST00000421897 457 ntBASIC19.89■□□□□ 0.77
RTL9Q8NET4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 RPL13P2-201ENST00000440687 659 ntBASIC19.89■□□□□ 0.77
RTL9Q8NET4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC093726.1-201ENST00000608064 963 ntBASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AC106820.2-201ENST00000563775 3264 ntBASIC19.89■□□□□ 0.77
RTL9Q8NET4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 REXO1L8P-201ENST00000604378 1897 ntBASIC19.89■□□□□ 0.77
RTL9Q8NET4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RTL9Q8NET4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTL9Q8NET4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 AC020916.1-201ENST00000587762 1774 ntBASIC19.88■□□□□ 0.77
RTL9Q8NET4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 AC017083.2-201ENST00000608069 979 ntBASIC19.88■□□□□ 0.77
RTL9Q8NET4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RTL9Q8NET4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL9Q8NET4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTL9Q8NET4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms