Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 AL583810.1-201ENST00000553344 1045 ntBASIC12.75□□□□□ -0.37
C3orf56Q8N813 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 AC009053.2-201ENST00000563701 2365 ntBASIC12.75□□□□□ -0.37
C3orf56Q8N813 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.75□□□□□ -0.37
C3orf56Q8N813 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 AC018665.1-201ENST00000622927 1362 ntBASIC12.75□□□□□ -0.37
C3orf56Q8N813 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.75□□□□□ -0.37
C3orf56Q8N813 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.75□□□□□ -0.37
C3orf56Q8N813 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C3orf56Q8N813 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 KRT8P12-202ENST00000472924 1397 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 TUBB1P2-201ENST00000422712 1306 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 TUBB1P1-201ENST00000503144 1300 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC099548.2-209ENST00000480264 625 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC233724.13-201ENST00000598383 410 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
C3orf56Q8N813 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.74□□□□□ -0.37
C3orf56Q8N813 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.73□□□□□ -0.37
C3orf56Q8N813 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.73□□□□□ -0.37
C3orf56Q8N813 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.73□□□□□ -0.37
C3orf56Q8N813 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.73□□□□□ -0.37
C3orf56Q8N813 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C3orf56Q8N813 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.73□□□□□ -0.37
C3orf56Q8N813 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms