Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 KRT18P34-201ENST00000488218 1270 ntBASIC16.8■□□□□ 0.28
PAF1Q8N7H5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 RARRES2P8-201ENST00000566335 367 ntBASIC16.8■□□□□ 0.28
PAF1Q8N7H5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.8■□□□□ 0.28
PAF1Q8N7H5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 IGHV3-62-201ENST00000520057 340 ntBASIC16.79■□□□□ 0.28
PAF1Q8N7H5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 AC134684.3-201ENST00000641758 218 ntBASIC16.79■□□□□ 0.28
PAF1Q8N7H5 AC092902.6-201ENST00000641783 218 ntBASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 TNRC18P3-201ENST00000441896 2691 ntBASIC16.79■□□□□ 0.28
PAF1Q8N7H5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 WASH6P-202ENST00000359512 1437 ntBASIC16.79■□□□□ 0.28
PAF1Q8N7H5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PAF1Q8N7H5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AL355306.1-201ENST00000415580 579 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 RN7SL589P-201ENST00000481268 310 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms